Integration with 3rd party software

With our Software Developer Kit you can create specialized and fully integrated plug-ins to your CLC Workbench, giving you the flexibility of creating exactly the bioinformatics solution that you prefer. Already existing command-line programs are easily integrated using our command-line integration toolkit.


  • Integrate with instrument vendor software like Casava and BioScope.
  • Full integration of all your bioinformatics algorithms in one program.
  • Development of plug-ins that integrate all your specialized bioinformatics algorithms.
  • Advanced database searches in local and all global databases.
  • Storage of bioinformatics data in your own database.
  • Graphical and textual viewing of data in any way you want.
  • Full IT-support of your workflow.
  • Our expert in the consulting department can also assist develop if needed.

NGS cross platform solution

CLC bio offers a comprehensive analysis package which can analyze and visualize data from all major NGS platforms, such as Illumina, SOLiD, Roche 454, Ion Torrent, and HeliScope - as well as Sanger data.

Furthermore the graphical user-clients are platform independent, running on Mac OS X, Windows, and Linux - including 64bit versions.


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CLC bio and PSSC Labs deliver turnkey solution for full genome data analysis

02:59 sec.

Interview with Alex Lesser, Vice President Bioinformatics Solutions, PSSC Labs and Thomas Knudsen, CEO, CLC bio.

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